omicverse.utils.biocontext.query_reactome

omicverse.utils.biocontext.query_reactome#

omicverse.utils.biocontext.query_reactome(identifier, species='Homo sapiens', include_disease=True)[源代码]#

Query Reactome pathway database.

参数:

  • identifier (str) – Gene symbol, UniProt ID, or Reactome stable ID.

  • species (str) – Species name. Default 'Homo sapiens'.

  • include_disease (bool) – Include disease-related pathways.

返回:

Reactome pathway analysis results.

返回类型:

dict

目录