omicverse.pl.CellChatViz
========================

.. currentmodule:: omicverse.pl

.. autoclass:: CellChatViz

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~CellChatViz.__init__
      ~CellChatViz.analyze_pathway_statistics
      ~CellChatViz.computeNetSimilarity
      ~CellChatViz.compute_aggregated_network
      ~CellChatViz.compute_communication_prob
      ~CellChatViz.compute_network_similarity
      ~CellChatViz.compute_pathway_communication
      ~CellChatViz.compute_pathway_network
      ~CellChatViz.demo_curved_arrows
      ~CellChatViz.extractEnrichedLR
      ~CellChatViz.get_ligand_receptor_pairs
      ~CellChatViz.get_signaling_matrix
      ~CellChatViz.get_signaling_pathways
      ~CellChatViz.get_significant_pathways_v2
      ~CellChatViz.identifyCommunicationPatterns
      ~CellChatViz.identifyOverExpressedGenes
      ~CellChatViz.identify_signaling_role
      ~CellChatViz.mean
      ~CellChatViz.netAnalysis_computeCentrality
      ~CellChatViz.netAnalysis_contribution
      ~CellChatViz.netAnalysis_signalingRole_heatmap
      ~CellChatViz.netAnalysis_signalingRole_network
      ~CellChatViz.netAnalysis_signalingRole_network_marsilea
      ~CellChatViz.netAnalysis_signalingRole_scatter
      ~CellChatViz.netEmbedding
      ~CellChatViz.netVisual_aggregate
      ~CellChatViz.netVisual_bubble
      ~CellChatViz.netVisual_bubble_lr
      ~CellChatViz.netVisual_bubble_marsilea
      ~CellChatViz.netVisual_chord
      ~CellChatViz.netVisual_chord_LR
      ~CellChatViz.netVisual_chord_cell
      ~CellChatViz.netVisual_chord_gene
      ~CellChatViz.netVisual_circle
      ~CellChatViz.netVisual_circle_focused
      ~CellChatViz.netVisual_diffusion
      ~CellChatViz.netVisual_heatmap
      ~CellChatViz.netVisual_heatmap_marsilea
      ~CellChatViz.netVisual_heatmap_marsilea_focused
      ~CellChatViz.netVisual_hierarchy
      ~CellChatViz.netVisual_individual
      ~CellChatViz.netVisual_individual_circle
      ~CellChatViz.netVisual_individual_circle_incoming
      ~CellChatViz.netVisual_signaling_heatmap
      ~CellChatViz.netVisual_single_circle
      ~CellChatViz.plot_all_visualizations
      ~CellChatViz.pvalue
      ~CellChatViz.selectK